Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC012317.2-201ENST00000623305 2251 ntBASIC15.85■□□□□ 0.13
C11orf88Q6PI97 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 FEM1AP3-201ENST00000403722 1741 ntBASIC15.85■□□□□ 0.13
C11orf88Q6PI97 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
C11orf88Q6PI97 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 MIR4785-201ENST00000585005 73 ntBASIC15.84■□□□□ 0.13
C11orf88Q6PI97 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 Z99916.2-201ENST00000604037 246 ntBASIC15.84■□□□□ 0.13
C11orf88Q6PI97 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 AL023875.1-201ENST00000640777 796 ntBASIC15.84■□□□□ 0.13
C11orf88Q6PI97 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf88Q6PI97 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
C11orf88Q6PI97 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
C11orf88Q6PI97 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
C11orf88Q6PI97 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.83■□□□□ 0.13
C11orf88Q6PI97 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.83■□□□□ 0.13
C11orf88Q6PI97 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
C11orf88Q6PI97 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
C11orf88Q6PI97 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.83■□□□□ 0.13
C11orf88Q6PI97 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 KRASP1-201ENST00000407852 552 ntBASIC15.83■□□□□ 0.12
C11orf88Q6PI97 AL353807.1-201ENST00000427475 662 ntBASIC15.83■□□□□ 0.12
C11orf88Q6PI97 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.83■□□□□ 0.12
C11orf88Q6PI97 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms