Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 AP001094.4-201ENST00000579008 2176 ntBASIC17.52■□□□□ 0.4
RNF220Q5VTB9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 AC092850.2-201ENST00000623821 2697 ntBASIC17.52■□□□□ 0.4
RNF220Q5VTB9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 POU5F1P3-201ENST00000428824 1078 ntBASIC17.52■□□□□ 0.4
RNF220Q5VTB9 SLC25A6P5-201ENST00000435663 894 ntBASIC17.52■□□□□ 0.4
RNF220Q5VTB9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF220Q5VTB9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF220Q5VTB9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 MIR4651-201ENST00000582622 73 ntBASIC17.51■□□□□ 0.39
RNF220Q5VTB9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RNF220Q5VTB9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 PCDHA1-201ENST00000378133 2726 ntBASIC17.5■□□□□ 0.39
RNF220Q5VTB9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 AL353807.1-201ENST00000427475 662 ntBASIC17.5■□□□□ 0.39
RNF220Q5VTB9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 AC131212.4-201ENST00000623606 975 ntBASIC17.5■□□□□ 0.39
RNF220Q5VTB9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF220Q5VTB9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms