Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 EGLN1P1-201ENST00000531623 762 ntBASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ATPAF1Q5TC12 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 CCR12P-201ENST00000446203 998 ntBASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 NAPSB-206ENST00000562112 1266 ntBASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 AL353719.1-201ENST00000566847 864 ntBASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 AC012317.2-201ENST00000623305 2251 ntBASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.78■□□□□ 0.12
ATPAF1Q5TC12 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 AC010947.1-201ENST00000623454 693 ntBASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 AC073912.3-201ENST00000624414 853 ntBASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 AC116562.4-202ENST00000641738 218 ntBASIC15.77■□□□□ 0.12
ATPAF1Q5TC12 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 CYP2D8P-201ENST00000433633 1490 ntBASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.77■□□□□ 0.11
ATPAF1Q5TC12 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.76■□□□□ 0.11
ATPAF1Q5TC12 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms