Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 FZD10-202ENST00000539839 3282 ntBASIC20.66■□□□□ 0.9
LONRF3Q496Y0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 KRT18P23-201ENST00000435622 1283 ntBASIC20.66■□□□□ 0.9
LONRF3Q496Y0 KRT18P38-201ENST00000449496 1282 ntBASIC20.66■□□□□ 0.9
LONRF3Q496Y0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 AC009102.3-201ENST00000623118 1491 ntBASIC20.66■□□□□ 0.9
LONRF3Q496Y0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LONRF3Q496Y0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 FLJ13224-201ENST00000313737 1514 ntBASIC20.65■□□□□ 0.9
LONRF3Q496Y0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.65■□□□□ 0.9
LONRF3Q496Y0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.64■□□□□ 0.9
LONRF3Q496Y0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LONRF3Q496Y0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.64■□□□□ 0.9
LONRF3Q496Y0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LONRF3Q496Y0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LONRF3Q496Y0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 MIR149-201ENST00000384879 89 ntBASIC20.64■□□□□ 0.89
LONRF3Q496Y0 UPK3BP1-201ENST00000428678 509 ntBASIC20.64■□□□□ 0.89
LONRF3Q496Y0 SLC25A6P5-201ENST00000435663 894 ntBASIC20.64■□□□□ 0.89
LONRF3Q496Y0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 AL512604.3-201ENST00000569583 964 ntBASIC20.64■□□□□ 0.89
LONRF3Q496Y0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 LINC01126-201ENST00000623515 1646 ntBASIC20.64■□□□□ 0.89
LONRF3Q496Y0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LONRF3Q496Y0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LONRF3Q496Y0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms