Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 AC113347.1-201ENST00000413321 391 ntBASIC15.92■□□□□ 0.14
SEC61A1P61619 EGLN1P1-201ENST00000531623 762 ntBASIC15.92■□□□□ 0.14
SEC61A1P61619 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SEC61A1P61619 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.92■□□□□ 0.14
SEC61A1P61619 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SEC61A1P61619 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.92■□□□□ 0.14
SEC61A1P61619 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 AC134043.2-201ENST00000624206 2238 ntBASIC15.92■□□□□ 0.14
SEC61A1P61619 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
SEC61A1P61619 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.92■□□□□ 0.14
SEC61A1P61619 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SEC61A1P61619 KRT8P11-201ENST00000409686 1436 ntBASIC15.92■□□□□ 0.14
SEC61A1P61619 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SEC61A1P61619 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SEC61A1P61619 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.92■□□□□ 0.14
SEC61A1P61619 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
SEC61A1P61619 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SEC61A1P61619 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SEC61A1P61619 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SEC61A1P61619 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.91■□□□□ 0.14
SEC61A1P61619 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SEC61A1P61619 TERF1P1-201ENST00000311003 1181 ntBASIC15.91■□□□□ 0.14
SEC61A1P61619 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.91■□□□□ 0.14
SEC61A1P61619 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SEC61A1P61619 TMPOP1-202ENST00000424642 1267 ntBASIC15.91■□□□□ 0.14
SEC61A1P61619 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.91■□□□□ 0.14
SEC61A1P61619 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.91■□□□□ 0.14
SEC61A1P61619 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SEC61A1P61619 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SEC61A1P61619 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.91■□□□□ 0.14
SEC61A1P61619 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.91■□□□□ 0.14
SEC61A1P61619 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.91■□□□□ 0.14
SEC61A1P61619 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SEC61A1P61619 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SEC61A1P61619 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.91■□□□□ 0.14
SEC61A1P61619 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.91■□□□□ 0.14
SEC61A1P61619 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SEC61A1P61619 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SEC61A1P61619 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEC61A1P61619 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.9■□□□□ 0.14
SEC61A1P61619 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.9■□□□□ 0.14
SEC61A1P61619 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
SEC61A1P61619 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 MIR1224-201ENST00000408193 85 ntBASIC15.9■□□□□ 0.14
SEC61A1P61619 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SEC61A1P61619 AC010203.1-204ENST00000548782 407 ntBASIC15.9■□□□□ 0.14
SEC61A1P61619 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.9■□□□□ 0.14
SEC61A1P61619 CKBP1-201ENST00000565489 1086 ntBASIC15.9■□□□□ 0.14
SEC61A1P61619 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
SEC61A1P61619 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 FAM87A-204ENST00000613235 858 ntBASIC15.9■□□□□ 0.14
SEC61A1P61619 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.9■□□□□ 0.14
SEC61A1P61619 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.9■□□□□ 0.14
SEC61A1P61619 AC012317.2-201ENST00000623305 2251 ntBASIC15.9■□□□□ 0.14
SEC61A1P61619 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SEC61A1P61619 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms