Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GTF2A1P52655 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GTF2A1P52655 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
GTF2A1P52655 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.83■□□□□ 0.45
GTF2A1P52655 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
GTF2A1P52655 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GTF2A1P52655 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
GTF2A1P52655 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
GTF2A1P52655 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.83■□□□□ 0.45
GTF2A1P52655 AC104640.1-201ENST00000562617 2109 ntBASIC17.83■□□□□ 0.45
GTF2A1P52655 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GTF2A1P52655 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.83■□□□□ 0.45
GTF2A1P52655 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.83■□□□□ 0.45
GTF2A1P52655 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.83■□□□□ 0.44
GTF2A1P52655 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.83■□□□□ 0.44
GTF2A1P52655 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.83■□□□□ 0.44
GTF2A1P52655 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.83■□□□□ 0.44
GTF2A1P52655 AF213884.3-201ENST00000563833 479 ntBASIC17.83■□□□□ 0.44
GTF2A1P52655 AC138907.5-202ENST00000569484 235 ntBASIC17.83■□□□□ 0.44
GTF2A1P52655 AC106739.1-201ENST00000617035 715 ntBASIC17.83■□□□□ 0.44
GTF2A1P52655 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.83■□□□□ 0.44
GTF2A1P52655 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.83■□□□□ 0.44
GTF2A1P52655 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.83■□□□□ 0.44
GTF2A1P52655 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GTF2A1P52655 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.83■□□□□ 0.44
GTF2A1P52655 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 AC126755.1-201ENST00000525846 6405 ntBASIC17.83■□□□□ 0.44
GTF2A1P52655 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GTF2A1P52655 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.83■□□□□ 0.44
GTF2A1P52655 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A1P52655 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
GTF2A1P52655 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GTF2A1P52655 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 IRX1P1-201ENST00000438849 1838 ntBASIC17.82■□□□□ 0.44
GTF2A1P52655 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.82■□□□□ 0.44
GTF2A1P52655 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.82■□□□□ 0.44
GTF2A1P52655 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.82■□□□□ 0.44
GTF2A1P52655 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.82■□□□□ 0.44
GTF2A1P52655 MIR939-201ENST00000401314 82 ntBASIC17.82■□□□□ 0.44
GTF2A1P52655 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A1P52655 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.82■□□□□ 0.44
GTF2A1P52655 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 CICP13-201ENST00000422015 2789 ntBASIC17.82■□□□□ 0.44
GTF2A1P52655 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.82■□□□□ 0.44
GTF2A1P52655 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GTF2A1P52655 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GTF2A1P52655 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 AL603756.1-201ENST00000606511 2163 ntBASIC17.81■□□□□ 0.44
GTF2A1P52655 KRT8P36-201ENST00000489121 1440 ntBASIC17.81■□□□□ 0.44
GTF2A1P52655 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
GTF2A1P52655 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A1P52655 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.81■□□□□ 0.44
GTF2A1P52655 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A1P52655 AC144831.1-201ENST00000573312 2656 ntBASIC17.81■□□□□ 0.44
GTF2A1P52655 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.81■□□□□ 0.44
GTF2A1P52655 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.81■□□□□ 0.44
GTF2A1P52655 EDA-201ENST00000338901 1233 ntBASIC17.81■□□□□ 0.44
GTF2A1P52655 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GTF2A1P52655 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms