Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RORAP35398 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.23■□□□□ 0.35
RORAP35398 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.23■□□□□ 0.35
RORAP35398 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 AL024508.2-201ENST00000607749 1894 ntBASIC17.23■□□□□ 0.35
RORAP35398 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.23■□□□□ 0.35
RORAP35398 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.23■□□□□ 0.35
RORAP35398 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.23■□□□□ 0.35
RORAP35398 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.23■□□□□ 0.35
RORAP35398 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.23■□□□□ 0.35
RORAP35398 FAAHP1-202ENST00000446499 1238 ntBASIC17.23■□□□□ 0.35
RORAP35398 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.23■□□□□ 0.35
RORAP35398 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.23■□□□□ 0.35
RORAP35398 KRT18P31-201ENST00000506277 1292 ntBASIC17.23■□□□□ 0.35
RORAP35398 AC091304.2-201ENST00000564639 760 ntBASIC17.23■□□□□ 0.35
RORAP35398 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.23■□□□□ 0.35
RORAP35398 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.23■□□□□ 0.35
RORAP35398 AL353801.3-201ENST00000609898 542 ntBASIC17.23■□□□□ 0.35
RORAP35398 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.23■□□□□ 0.35
RORAP35398 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.23■□□□□ 0.35
RORAP35398 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RORAP35398 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
RORAP35398 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RORAP35398 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RORAP35398 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RORAP35398 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.23■□□□□ 0.35
RORAP35398 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RORAP35398 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RORAP35398 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.22■□□□□ 0.35
RORAP35398 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RORAP35398 AC004408.2-201ENST00000623613 2777 ntBASIC17.22■□□□□ 0.35
RORAP35398 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RORAP35398 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.22■□□□□ 0.35
RORAP35398 AC091607.1-201ENST00000490318 1060 ntBASIC17.22■□□□□ 0.35
RORAP35398 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.22■□□□□ 0.35
RORAP35398 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.22■□□□□ 0.35
RORAP35398 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RORAP35398 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.22■□□□□ 0.35
RORAP35398 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RORAP35398 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RORAP35398 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RORAP35398 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RORAP35398 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.21■□□□□ 0.35
RORAP35398 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RORAP35398 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RORAP35398 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RORAP35398 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RORAP35398 VENTXP7-201ENST00000475503 772 ntBASIC17.21■□□□□ 0.35
RORAP35398 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.21■□□□□ 0.35
RORAP35398 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.21■□□□□ 0.35
RORAP35398 AC099336.1-202ENST00000602961 463 ntBASIC17.21■□□□□ 0.35
RORAP35398 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 AC099343.3-201ENST00000605834 2503 ntBASIC17.21■□□□□ 0.35
RORAP35398 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RORAP35398 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RORAP35398 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RORAP35398 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RORAP35398 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.2■□□□□ 0.34
RORAP35398 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RORAP35398 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RORAP35398 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RORAP35398 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RORAP35398 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RORAP35398 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RORAP35398 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms