Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MS4A1P11836 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC23.33■■□□□ 1.33
MS4A1P11836 AL096828.2-201ENST00000567259 1965 ntBASIC23.33■■□□□ 1.33
MS4A1P11836 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
MS4A1P11836 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MS4A1P11836 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.33■■□□□ 1.33
MS4A1P11836 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.33■■□□□ 1.33
MS4A1P11836 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
MS4A1P11836 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MS4A1P11836 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MS4A1P11836 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.33■■□□□ 1.33
MS4A1P11836 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MS4A1P11836 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
MS4A1P11836 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
MS4A1P11836 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.33■■□□□ 1.33
MS4A1P11836 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MS4A1P11836 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
MS4A1P11836 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
MS4A1P11836 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC23.33■■□□□ 1.33
MS4A1P11836 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC23.33■■□□□ 1.33
MS4A1P11836 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC23.33■■□□□ 1.33
MS4A1P11836 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
MS4A1P11836 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MS4A1P11836 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
MS4A1P11836 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
MS4A1P11836 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
MS4A1P11836 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC23.32■■□□□ 1.32
MS4A1P11836 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC23.32■■□□□ 1.32
MS4A1P11836 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.32■■□□□ 1.32
MS4A1P11836 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
MS4A1P11836 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.32■■□□□ 1.32
MS4A1P11836 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.32■■□□□ 1.32
MS4A1P11836 AC092865.7-201ENST00000641832 219 ntBASIC23.32■■□□□ 1.32
MS4A1P11836 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC23.32■■□□□ 1.32
MS4A1P11836 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MS4A1P11836 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.32■■□□□ 1.32
MS4A1P11836 REXO1L9P-201ENST00000604264 2108 ntBASIC23.32■■□□□ 1.32
MS4A1P11836 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC23.32■■□□□ 1.32
MS4A1P11836 AC009053.2-201ENST00000563701 2365 ntBASIC23.32■■□□□ 1.32
MS4A1P11836 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
MS4A1P11836 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
MS4A1P11836 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.31■■□□□ 1.32
MS4A1P11836 ECEL1P3-201ENST00000427961 737 ntBASIC23.31■■□□□ 1.32
MS4A1P11836 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.31■■□□□ 1.32
MS4A1P11836 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.31■■□□□ 1.32
MS4A1P11836 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.31■■□□□ 1.32
MS4A1P11836 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.31■■□□□ 1.32
MS4A1P11836 AC008687.5-201ENST00000593746 558 ntBASIC23.31■■□□□ 1.32
MS4A1P11836 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 AC145285.6-201ENST00000604632 637 ntBASIC23.31■■□□□ 1.32
MS4A1P11836 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.31■■□□□ 1.32
MS4A1P11836 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.31■■□□□ 1.32
MS4A1P11836 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
MS4A1P11836 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC23.31■■□□□ 1.32
MS4A1P11836 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.31■■□□□ 1.32
MS4A1P11836 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.31■■□□□ 1.32
MS4A1P11836 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
MS4A1P11836 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MS4A1P11836 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
MS4A1P11836 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.3■■□□□ 1.32
MS4A1P11836 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
MS4A1P11836 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC23.3■■□□□ 1.32
MS4A1P11836 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC23.3■■□□□ 1.32
MS4A1P11836 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.3■■□□□ 1.32
MS4A1P11836 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23.3■■□□□ 1.32
MS4A1P11836 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
MS4A1P11836 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.3■■□□□ 1.32
MS4A1P11836 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.3■■□□□ 1.32
MS4A1P11836 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.3■■□□□ 1.32
MS4A1P11836 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.3■■□□□ 1.32
MS4A1P11836 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 AC024243.1-201ENST00000609234 778 ntBASIC23.3■■□□□ 1.32
MS4A1P11836 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.3■■□□□ 1.32
MS4A1P11836 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MS4A1P11836 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms