Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.24■□□□□ 0.51
THRAP10827 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.24■□□□□ 0.51
THRAP10827 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THRAP10827 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THRAP10827 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THRAP10827 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
THRAP10827 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
THRAP10827 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
THRAP10827 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.23■□□□□ 0.51
THRAP10827 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
THRAP10827 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
THRAP10827 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.23■□□□□ 0.51
THRAP10827 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
THRAP10827 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
THRAP10827 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.23■□□□□ 0.51
THRAP10827 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
THRAP10827 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 KRT18P38-201ENST00000449496 1282 ntBASIC18.23■□□□□ 0.51
THRAP10827 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.23■□□□□ 0.51
THRAP10827 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
THRAP10827 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.23■□□□□ 0.51
THRAP10827 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.23■□□□□ 0.51
THRAP10827 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.23■□□□□ 0.51
THRAP10827 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.23■□□□□ 0.51
THRAP10827 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.23■□□□□ 0.51
THRAP10827 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.23■□□□□ 0.51
THRAP10827 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
THRAP10827 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
THRAP10827 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THRAP10827 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.23■□□□□ 0.51
THRAP10827 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
THRAP10827 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.22■□□□□ 0.51
THRAP10827 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.22■□□□□ 0.51
THRAP10827 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.22■□□□□ 0.51
THRAP10827 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
THRAP10827 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 PCED1CP-201ENST00000419887 785 ntBASIC18.22■□□□□ 0.51
THRAP10827 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.22■□□□□ 0.51
THRAP10827 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.22■□□□□ 0.51
THRAP10827 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.22■□□□□ 0.51
THRAP10827 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
THRAP10827 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
THRAP10827 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.22■□□□□ 0.51
THRAP10827 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.22■□□□□ 0.51
THRAP10827 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THRAP10827 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
THRAP10827 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
THRAP10827 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.21■□□□□ 0.51
THRAP10827 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
THRAP10827 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THRAP10827 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.21■□□□□ 0.51
THRAP10827 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
THRAP10827 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.21■□□□□ 0.51
THRAP10827 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.21■□□□□ 0.51
THRAP10827 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THRAP10827 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms