Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CYP3A4P08684 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CYP3A4P08684 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CYP3A4P08684 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYP3A4P08684 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CYP3A4P08684 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CYP3A4P08684 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.37■□□□□ 0.85
CYP3A4P08684 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CYP3A4P08684 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.37■□□□□ 0.85
CYP3A4P08684 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.37■□□□□ 0.85
CYP3A4P08684 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP3A4P08684 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.37■□□□□ 0.85
CYP3A4P08684 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.37■□□□□ 0.85
CYP3A4P08684 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP3A4P08684 AL138831.2-201ENST00000606564 490 ntBASIC20.37■□□□□ 0.85
CYP3A4P08684 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CYP3A4P08684 AC012313.10-201ENST00000623509 926 ntBASIC20.37■□□□□ 0.85
CYP3A4P08684 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CYP3A4P08684 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.37■□□□□ 0.85
CYP3A4P08684 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYP3A4P08684 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.36■□□□□ 0.85
CYP3A4P08684 AC125634.1-201ENST00000438758 1403 ntBASIC20.36■□□□□ 0.85
CYP3A4P08684 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.36■□□□□ 0.85
CYP3A4P08684 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CYP3A4P08684 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CYP3A4P08684 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CYP3A4P08684 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CYP3A4P08684 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.36■□□□□ 0.85
CYP3A4P08684 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.36■□□□□ 0.85
CYP3A4P08684 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.36■□□□□ 0.85
CYP3A4P08684 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.36■□□□□ 0.85
CYP3A4P08684 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.36■□□□□ 0.85
CYP3A4P08684 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.36■□□□□ 0.85
CYP3A4P08684 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CYP3A4P08684 REXO1L9P-201ENST00000604264 2108 ntBASIC20.36■□□□□ 0.85
CYP3A4P08684 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.36■□□□□ 0.85
CYP3A4P08684 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CYP3A4P08684 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYP3A4P08684 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CYP3A4P08684 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.35■□□□□ 0.85
CYP3A4P08684 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.35■□□□□ 0.85
CYP3A4P08684 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CYP3A4P08684 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.35■□□□□ 0.85
CYP3A4P08684 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.35■□□□□ 0.85
CYP3A4P08684 BNIP3P18-201ENST00000593976 575 ntBASIC20.35■□□□□ 0.85
CYP3A4P08684 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.35■□□□□ 0.85
CYP3A4P08684 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.35■□□□□ 0.85
CYP3A4P08684 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 ABALON-201ENST00000629058 1903 ntBASIC20.35■□□□□ 0.85
CYP3A4P08684 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CYP3A4P08684 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CYP3A4P08684 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.35■□□□□ 0.85
CYP3A4P08684 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYP3A4P08684 KRT8P47-201ENST00000604727 1398 ntBASIC20.34■□□□□ 0.85
CYP3A4P08684 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP3A4P08684 AC097374.2-201ENST00000618617 1306 ntBASIC20.34■□□□□ 0.85
CYP3A4P08684 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.34■□□□□ 0.85
CYP3A4P08684 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP3A4P08684 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CYP3A4P08684 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms