Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
THBS1P07996 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
THBS1P07996 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
THBS1P07996 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THBS1P07996 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
THBS1P07996 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
THBS1P07996 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.73■□□□□ 0.27
THBS1P07996 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
THBS1P07996 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THBS1P07996 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
THBS1P07996 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THBS1P07996 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
THBS1P07996 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
THBS1P07996 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
THBS1P07996 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
THBS1P07996 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS1P07996 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.72■□□□□ 0.27
THBS1P07996 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS1P07996 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS1P07996 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS1P07996 AC005363.2-201ENST00000618631 242 ntBASIC16.72■□□□□ 0.27
THBS1P07996 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
THBS1P07996 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS1P07996 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
THBS1P07996 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.72■□□□□ 0.27
THBS1P07996 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
THBS1P07996 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
THBS1P07996 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.71■□□□□ 0.27
THBS1P07996 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
THBS1P07996 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
THBS1P07996 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.71■□□□□ 0.27
THBS1P07996 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 AC113347.1-201ENST00000413321 391 ntBASIC16.71■□□□□ 0.27
THBS1P07996 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.71■□□□□ 0.27
THBS1P07996 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
THBS1P07996 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.71■□□□□ 0.27
THBS1P07996 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.71■□□□□ 0.27
THBS1P07996 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.71■□□□□ 0.27
THBS1P07996 AC141257.4-201ENST00000634557 245 ntBASIC16.71■□□□□ 0.27
THBS1P07996 AC136944.6-201ENST00000634818 245 ntBASIC16.71■□□□□ 0.27
THBS1P07996 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
THBS1P07996 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.71■□□□□ 0.27
THBS1P07996 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
THBS1P07996 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
THBS1P07996 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
THBS1P07996 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
THBS1P07996 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
THBS1P07996 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
THBS1P07996 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
THBS1P07996 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
THBS1P07996 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
THBS1P07996 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
THBS1P07996 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
THBS1P07996 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
THBS1P07996 AC090340.1-201ENST00000620778 4980 ntBASIC16.7■□□□□ 0.26
THBS1P07996 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
THBS1P07996 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms