Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.1■□□□□ 0.01
CTSDP07339 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 AC009102.3-201ENST00000623118 1491 ntBASIC15.1■□□□□ 0.01
CTSDP07339 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.1■□□□□ 0.01
CTSDP07339 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.1■□□□□ 0.01
CTSDP07339 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.1■□□□□ 0.01
CTSDP07339 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CTSDP07339 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.1■□□□□ 0.01
CTSDP07339 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.1■□□□□ 0.01
CTSDP07339 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 AC022211.2-201ENST00000585075 2527 ntBASIC15.1■□□□□ 0.01
CTSDP07339 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 AL138688.1-201ENST00000624851 1594 ntBASIC15.1■□□□□ 0.01
CTSDP07339 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.1■□□□□ 0.01
CTSDP07339 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
CTSDP07339 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CTSDP07339 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.09■□□□□ 0.01
CTSDP07339 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CTSDP07339 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.09■□□□□ 0.01
CTSDP07339 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.09■□□□□ 0.01
CTSDP07339 MIR149-201ENST00000384879 89 ntBASIC15.09■□□□□ 0.01
CTSDP07339 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CTSDP07339 MCCD1P1-208ENST00000445732 328 ntBASIC15.09■□□□□ 0.01
CTSDP07339 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.09■□□□□ 0.01
CTSDP07339 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.09■□□□□ 0.01
CTSDP07339 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.09■□□□□ 0.01
CTSDP07339 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.09■□□□□ 0.01
CTSDP07339 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.09■□□□□ 0.01
CTSDP07339 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.09■□□□□ 0.01
CTSDP07339 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CTSDP07339 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.09■□□□□ 0.01
CTSDP07339 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 NKILA-202ENST00000614771 2598 ntBASIC15.09■□□□□ 0.01
CTSDP07339 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.09■□□□□ 0.01
CTSDP07339 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.09■□□□□ 0.01
CTSDP07339 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CTSDP07339 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.09■□□□□ 0.01
CTSDP07339 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CTSDP07339 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.08■□□□□ 0.01
CTSDP07339 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CTSDP07339 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CTSDP07339 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CTSDP07339 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CTSDP07339 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.08■□□□□ 0
CTSDP07339 AC106820.2-201ENST00000563775 3264 ntBASIC15.08■□□□□ 0
CTSDP07339 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CTSDP07339 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.08■□□□□ 0
CTSDP07339 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CTSDP07339 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CTSDP07339 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.08■□□□□ 0
CTSDP07339 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CTSDP07339 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CTSDP07339 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.08■□□□□ 0
CTSDP07339 AL023284.2-201ENST00000405850 579 ntBASIC15.08■□□□□ 0
CTSDP07339 KRASP1-201ENST00000407852 552 ntBASIC15.08■□□□□ 0
CTSDP07339 KRT17P3-201ENST00000420566 1262 ntBASIC15.08■□□□□ 0
CTSDP07339 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.08■□□□□ 0
CTSDP07339 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CTSDP07339 AC008403.3-201ENST00000598924 454 ntBASIC15.08■□□□□ 0
CTSDP07339 AC069544.1-201ENST00000609399 999 ntBASIC15.08■□□□□ 0
CTSDP07339 AC008622.2-201ENST00000617006 1229 ntBASIC15.08■□□□□ 0
CTSDP07339 AC011298.2-201ENST00000617989 482 ntBASIC15.08■□□□□ 0
CTSDP07339 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.08■□□□□ 0
CTSDP07339 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.08■□□□□ 0
CTSDP07339 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CTSDP07339 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.08■□□□□ 0
CTSDP07339 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms