Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 ZNF444P1-201ENST00000559497 298 ntBASIC18.41■□□□□ 0.54
HLA-DQB2P05538 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 NTF6B-201ENST00000591913 560 ntBASIC18.41■□□□□ 0.54
HLA-DQB2P05538 AC004263.2-201ENST00000617183 678 ntBASIC18.41■□□□□ 0.54
HLA-DQB2P05538 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.41■□□□□ 0.54
HLA-DQB2P05538 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 AL133373.2-201ENST00000623187 2828 ntBASIC18.4■□□□□ 0.54
HLA-DQB2P05538 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB2P05538 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DQB2P05538 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DQB2P05538 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HLA-DQB2P05538 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms