Protein–RNA interactions for Protein: P04553

PRM1, Sperm protamine P1, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1P04553 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC4.41□□□□□ -1.7
PRM1P04553 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRM1P04553 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC4.41□□□□□ -1.7
PRM1P04553 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC4.41□□□□□ -1.7
PRM1P04553 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC4.41□□□□□ -1.7
PRM1P04553 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
PRM1P04553 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRM1P04553 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRM1P04553 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC4.41□□□□□ -1.7
PRM1P04553 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRM1P04553 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 POR-209ENST00000439269 1858 ntTSL 2 BASIC4.41□□□□□ -1.7
PRM1P04553 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRM1P04553 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRM1P04553 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRM1P04553 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRM1P04553 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
PRM1P04553 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PRM1P04553 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC4.4□□□□□ -1.7
PRM1P04553 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC4.4□□□□□ -1.7
PRM1P04553 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
PRM1P04553 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PRM1P04553 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 AL731571.1-201ENST00000617058 5428 ntBASIC4.4□□□□□ -1.7
PRM1P04553 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PRM1P04553 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC4.4□□□□□ -1.7
PRM1P04553 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PRM1P04553 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC4.4□□□□□ -1.7
PRM1P04553 ING5-213ENST00000636051 4199 ntTSL 5 BASIC4.4□□□□□ -1.7
PRM1P04553 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRM1P04553 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC4.4□□□□□ -1.7
PRM1P04553 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC4.4□□□□□ -1.71
PRM1P04553 AL034346.1-201ENST00000568244 1277 ntBASIC4.4□□□□□ -1.71
PRM1P04553 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC4.4□□□□□ -1.71
PRM1P04553 NRG1-221ENST00000614767 762 ntTSL 5 BASIC4.4□□□□□ -1.71
PRM1P04553 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC4.4□□□□□ -1.71
PRM1P04553 SMPD5-203ENST00000639008 1464 ntBASIC4.4□□□□□ -1.71
PRM1P04553 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PRM1P04553 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRM1P04553 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms