Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCRP04035 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.43■□□□□ 0.86
HMGCRP04035 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGCRP04035 AC211476.1-201ENST00000503899 468 ntBASIC20.43■□□□□ 0.86
HMGCRP04035 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCRP04035 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGCRP04035 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGCRP04035 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGCRP04035 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCRP04035 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCRP04035 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HMGCRP04035 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCRP04035 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCRP04035 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGCRP04035 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGCRP04035 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HMGCRP04035 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 AL024508.2-201ENST00000607749 1894 ntBASIC20.42■□□□□ 0.86
HMGCRP04035 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 AC009947.1-201ENST00000444350 727 ntBASIC20.42■□□□□ 0.86
HMGCRP04035 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.42■□□□□ 0.86
HMGCRP04035 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGCRP04035 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.42■□□□□ 0.86
HMGCRP04035 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.42■□□□□ 0.86
HMGCRP04035 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGCRP04035 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HMGCRP04035 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGCRP04035 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCRP04035 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCRP04035 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCRP04035 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HMGCRP04035 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HMGCRP04035 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMGCRP04035 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGCRP04035 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGCRP04035 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.41■□□□□ 0.86
HMGCRP04035 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGCRP04035 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMGCRP04035 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCRP04035 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCRP04035 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGCRP04035 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HMGCRP04035 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 KRT18P28-201ENST00000453838 1332 ntBASIC20.4■□□□□ 0.86
HMGCRP04035 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HMGCRP04035 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGCRP04035 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.4■□□□□ 0.86
HMGCRP04035 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCRP04035 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HMGCRP04035 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCRP04035 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.39■□□□□ 0.86
HMGCRP04035 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
HMGCRP04035 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCRP04035 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCRP04035 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCRP04035 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HMGCRP04035 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.39■□□□□ 0.85
HMGCRP04035 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.39■□□□□ 0.85
HMGCRP04035 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.39■□□□□ 0.85
HMGCRP04035 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
HMGCRP04035 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.39■□□□□ 0.85
HMGCRP04035 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCRP04035 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.39■□□□□ 0.85
HMGCRP04035 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.39■□□□□ 0.85
HMGCRP04035 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCRP04035 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.39■□□□□ 0.85
HMGCRP04035 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCRP04035 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGCRP04035 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCRP04035 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGCRP04035 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCRP04035 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCRP04035 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms