Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBC1P01850 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 AC135050.7-201ENST00000624508 2218 ntBASIC18.17■□□□□ 0.5
TRBC1P01850 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRBC1P01850 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBC1P01850 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 BX276092.5-203ENST00000456199 560 ntBASIC18.17■□□□□ 0.5
TRBC1P01850 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBC1P01850 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 AL121672.3-201ENST00000608644 468 ntBASIC18.17■□□□□ 0.5
TRBC1P01850 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBC1P01850 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBC1P01850 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBC1P01850 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBC1P01850 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRBC1P01850 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBC1P01850 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBC1P01850 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRBC1P01850 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBC1P01850 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
TRBC1P01850 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBC1P01850 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRBC1P01850 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRBC1P01850 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBC1P01850 AC016734.2-201ENST00000624325 1377 ntBASIC18.16■□□□□ 0.5
TRBC1P01850 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBC1P01850 ABALON-201ENST00000629058 1903 ntBASIC18.15■□□□□ 0.5
TRBC1P01850 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRBC1P01850 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRBC1P01850 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRBC1P01850 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBC1P01850 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBC1P01850 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
TRBC1P01850 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBC1P01850 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.15■□□□□ 0.5
TRBC1P01850 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 AC069148.1-201ENST00000608741 768 ntBASIC18.15■□□□□ 0.5
TRBC1P01850 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms