Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA3DO95025 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA3DO95025 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SEMA3DO95025 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA3DO95025 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA3DO95025 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEMA3DO95025 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.41■□□□□ 0.38
SEMA3DO95025 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.4■□□□□ 0.38
SEMA3DO95025 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SEMA3DO95025 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA3DO95025 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.4■□□□□ 0.38
SEMA3DO95025 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SEMA3DO95025 AC138028.4-201ENST00000564984 1845 ntBASIC17.4■□□□□ 0.38
SEMA3DO95025 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA3DO95025 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA3DO95025 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA3DO95025 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.4■□□□□ 0.38
SEMA3DO95025 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SEMA3DO95025 AC010203.1-204ENST00000548782 407 ntBASIC17.4■□□□□ 0.38
SEMA3DO95025 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.4■□□□□ 0.38
SEMA3DO95025 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.4■□□□□ 0.38
SEMA3DO95025 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SEMA3DO95025 REXO1L9P-201ENST00000604264 2108 ntBASIC17.4■□□□□ 0.38
SEMA3DO95025 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.4■□□□□ 0.38
SEMA3DO95025 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SEMA3DO95025 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEMA3DO95025 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SEMA3DO95025 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SEMA3DO95025 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SEMA3DO95025 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA3DO95025 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 AC099343.3-201ENST00000605834 2503 ntBASIC17.39■□□□□ 0.37
SEMA3DO95025 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA3DO95025 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 TERF1P1-201ENST00000311003 1181 ntBASIC17.39■□□□□ 0.37
SEMA3DO95025 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.39■□□□□ 0.37
SEMA3DO95025 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 AL137013.1-201ENST00000432946 1228 ntBASIC17.39■□□□□ 0.37
SEMA3DO95025 COX11P1-201ENST00000489116 835 ntBASIC17.39■□□□□ 0.37
SEMA3DO95025 GCSHP2-201ENST00000560971 527 ntBASIC17.39■□□□□ 0.37
SEMA3DO95025 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SEMA3DO95025 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA3DO95025 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.39■□□□□ 0.37
SEMA3DO95025 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SEMA3DO95025 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SEMA3DO95025 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.39■□□□□ 0.37
SEMA3DO95025 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEMA3DO95025 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.39■□□□□ 0.37
SEMA3DO95025 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA3DO95025 BX664615.1-201ENST00000443558 458 ntBASIC17.38■□□□□ 0.37
SEMA3DO95025 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA3DO95025 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SEMA3DO95025 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA3DO95025 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SEMA3DO95025 AC140113.3-201ENST00000605663 199 ntBASIC17.38■□□□□ 0.37
SEMA3DO95025 AL023973.1-201ENST00000624619 620 ntBASIC17.38■□□□□ 0.37
SEMA3DO95025 AL157888.1-201ENST00000631930 593 ntBASIC17.38■□□□□ 0.37
SEMA3DO95025 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA3DO95025 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA3DO95025 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.38■□□□□ 0.37
SEMA3DO95025 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SEMA3DO95025 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
SEMA3DO95025 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms