Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PFDN1O60925 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PFDN1O60925 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PFDN1O60925 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PFDN1O60925 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN1O60925 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN1O60925 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.25■□□□□ 0.19
PFDN1O60925 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.25■□□□□ 0.19
PFDN1O60925 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PFDN1O60925 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 AC074183.2-201ENST00000623112 922 ntBASIC16.25■□□□□ 0.19
PFDN1O60925 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PFDN1O60925 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.25■□□□□ 0.19
PFDN1O60925 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
PFDN1O60925 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.25■□□□□ 0.19
PFDN1O60925 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PFDN1O60925 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PFDN1O60925 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.24■□□□□ 0.19
PFDN1O60925 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.24■□□□□ 0.19
PFDN1O60925 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.24■□□□□ 0.19
PFDN1O60925 U85056.1-201ENST00000616429 682 ntBASIC16.24■□□□□ 0.19
PFDN1O60925 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.24■□□□□ 0.19
PFDN1O60925 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.24■□□□□ 0.19
PFDN1O60925 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PFDN1O60925 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PFDN1O60925 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PFDN1O60925 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.23■□□□□ 0.19
PFDN1O60925 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 KRT16P6-202ENST00000425692 1426 ntBASIC16.23■□□□□ 0.19
PFDN1O60925 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.23■□□□□ 0.19
PFDN1O60925 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.23■□□□□ 0.19
PFDN1O60925 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.23■□□□□ 0.19
PFDN1O60925 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PFDN1O60925 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.22■□□□□ 0.19
PFDN1O60925 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PFDN1O60925 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PFDN1O60925 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PFDN1O60925 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms