Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF11O60813 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEF11O60813 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF11O60813 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
PRAMEF11O60813 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF11O60813 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
PRAMEF11O60813 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PRAMEF11O60813 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.4■□□□□ 0.54
PRAMEF11O60813 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRAMEF11O60813 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.39■□□□□ 0.54
PRAMEF11O60813 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRAMEF11O60813 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PRAMEF11O60813 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 CHCHD2P8-201ENST00000429873 447 ntBASIC18.39■□□□□ 0.53
PRAMEF11O60813 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 TSSC2-201ENST00000450217 709 ntBASIC18.39■□□□□ 0.53
PRAMEF11O60813 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 AC090616.6-201ENST00000582640 721 ntBASIC18.39■□□□□ 0.53
PRAMEF11O60813 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEF11O60813 FLJ13224-201ENST00000313737 1514 ntBASIC18.39■□□□□ 0.53
PRAMEF11O60813 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEF11O60813 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRAMEF11O60813 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF11O60813 RN7SL606P-201ENST00000472779 293 ntBASIC18.38■□□□□ 0.53
PRAMEF11O60813 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 GUSBP12-201ENST00000513727 720 ntBASIC18.38■□□□□ 0.53
PRAMEF11O60813 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 AC069148.1-201ENST00000608741 768 ntBASIC18.38■□□□□ 0.53
PRAMEF11O60813 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PRAMEF11O60813 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEF11O60813 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEF11O60813 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEF11O60813 AC138028.4-201ENST00000564984 1845 ntBASIC18.37■□□□□ 0.53
PRAMEF11O60813 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF11O60813 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 AC068472.1-201ENST00000474589 881 ntBASIC18.37■□□□□ 0.53
PRAMEF11O60813 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEF11O60813 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms