Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.4■□□□□ 0.86
DDX39AO00148 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.4■□□□□ 0.86
DDX39AO00148 AP005901.3-202ENST00000581653 237 ntBASIC20.4■□□□□ 0.86
DDX39AO00148 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.4■□□□□ 0.86
DDX39AO00148 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.4■□□□□ 0.86
DDX39AO00148 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.4■□□□□ 0.86
DDX39AO00148 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
DDX39AO00148 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX39AO00148 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
DDX39AO00148 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX39AO00148 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
DDX39AO00148 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX39AO00148 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.39■□□□□ 0.85
DDX39AO00148 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.39■□□□□ 0.85
DDX39AO00148 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
DDX39AO00148 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX39AO00148 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX39AO00148 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
DDX39AO00148 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.39■□□□□ 0.85
DDX39AO00148 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
DDX39AO00148 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
DDX39AO00148 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
DDX39AO00148 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX39AO00148 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX39AO00148 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
DDX39AO00148 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 AL450487.1-201ENST00000426799 995 ntBASIC20.38■□□□□ 0.85
DDX39AO00148 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 AC104819.1-201ENST00000504587 486 ntBASIC20.38■□□□□ 0.85
DDX39AO00148 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX39AO00148 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX39AO00148 AC011840.4-201ENST00000578471 627 ntBASIC20.38■□□□□ 0.85
DDX39AO00148 AC138894.3-201ENST00000603787 634 ntBASIC20.38■□□□□ 0.85
DDX39AO00148 AL138781.2-201ENST00000617896 1843 ntBASIC20.38■□□□□ 0.85
DDX39AO00148 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX39AO00148 PHGDH-209ENST00000641074 1780 ntBASIC20.38■□□□□ 0.85
DDX39AO00148 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
DDX39AO00148 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
DDX39AO00148 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX39AO00148 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX39AO00148 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
DDX39AO00148 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DDX39AO00148 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
DDX39AO00148 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX39AO00148 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DDX39AO00148 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 FOSL1P1-201ENST00000511041 816 ntBASIC20.37■□□□□ 0.85
DDX39AO00148 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DDX39AO00148 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX39AO00148 Z69720.1-201ENST00000601483 472 ntBASIC20.37■□□□□ 0.85
DDX39AO00148 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX39AO00148 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
DDX39AO00148 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
DDX39AO00148 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DDX39AO00148 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX39AO00148 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
DDX39AO00148 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX39AO00148 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms