Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 AL162741.1-201ENST00000565563 1558 ntBASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 LINC00896-202ENST00000609602 2128 ntBASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PRORSD1P-202ENST00000563365 2154 ntBASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MIR4497-201ENST00000583208 89 ntBASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DGCR10-201ENST00000609839 495 ntBASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MIR6786-201ENST00000616843 113 ntBASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AC009053.2-201ENST00000563701 2365 ntBASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AC011298.2-201ENST00000617989 482 ntBASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms