Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC9.41□□□□□ -0.9
LINC01558Q9Y6Z2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 FEM1AP3-201ENST00000403722 1741 ntBASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 HES4-204ENST00000484667 667 ntTSL 3 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 SNX5-217ENST00000606557 1087 ntBASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LINC01558Q9Y6Z2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 AL365203.3-201ENST00000609742 2057 ntBASIC9.4□□□□□ -0.91
LINC01558Q9Y6Z2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC9.39□□□□□ -0.91
LINC01558Q9Y6Z2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms