Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 UNC93B6-202ENST00000528242 690 ntBASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 AL139424.1-201ENST00000607572 797 ntBASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 AP002414.3-201ENST00000589352 1468 ntBASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC2Q9Y5Z7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 AC112698.1-201ENST00000510299 916 ntBASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 AP001160.2-201ENST00000596071 487 ntBASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.94■□□□□ 0.62
HCFC2Q9Y5Z7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 AC005332.7-201ENST00000614046 2005 ntBASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 DNAJB3-201ENST00000446806 729 ntBASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 AC112482.1-201ENST00000492080 688 ntBASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 MIR3687-2-201ENST00000577708 61 ntBASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 MIR3687-1-201ENST00000614492 61 ntBASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 AP000867.4-201ENST00000641616 219 ntBASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HCFC2Q9Y5Z7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 PMS2P2-201ENST00000425039 1128 ntBASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 RPS8P6-201ENST00000426177 609 ntBASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 HMGN1P19-201ENST00000436976 333 ntBASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 RNA5SP416-201ENST00000516838 111 ntBASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HCFC2Q9Y5Z7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms