Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 AC069148.1-201ENST00000608741 768 ntBASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP13A3Q9H7F0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP13A3Q9H7F0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 AL353692.3-201ENST00000407031 1396 ntBASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 AC004263.2-201ENST00000617183 678 ntBASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP13A3Q9H7F0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP13A3Q9H7F0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP13A3Q9H7F0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP13A3Q9H7F0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms