Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 MIR149-201ENST00000384879 89 ntBASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 KRT18P41-201ENST00000518924 1277 ntBASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AC012615.1-201ENST00000565797 1299 ntBASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 BNIP3P18-201ENST00000593976 575 ntBASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-3Q9BYR4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AIRN-201ENST00000601203 4374 ntBASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
KRTAP4-3Q9BYR4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms