Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 POR-209ENST00000439269 1858 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 AP006587.1-201ENST00000534129 1502 ntBASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LCE3DQ9BYE3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AC138969.2-201ENST00000532739 9932 ntBASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AC004854.2-201ENST00000608450 1441 ntBASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 NKILA-202ENST00000614771 2598 ntBASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AK1-201ENST00000223836 736 ntTSL 3 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 MNT-208ENST00000575394 606 ntTSL 4 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 AC008694.1-202ENST00000636953 945 ntBASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC4.91□□□□□ -1.62
LCE3DQ9BYE3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms