Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 POM121L13P-201ENST00000422362 380 ntBASIC14.76□□□□□ -0.05
RAB40CQ96S21 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 AC131212.4-201ENST00000623606 975 ntBASIC14.76□□□□□ -0.05
RAB40CQ96S21 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 AL121761.2-201ENST00000598007 1648 ntBASIC14.76□□□□□ -0.05
RAB40CQ96S21 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40CQ96S21 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RAB40CQ96S21 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 UNC93B4-201ENST00000505679 747 ntBASIC14.75□□□□□ -0.05
RAB40CQ96S21 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.75□□□□□ -0.05
RAB40CQ96S21 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40CQ96S21 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40CQ96S21 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB40CQ96S21 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms