Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H2AAQ96QV6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H2AAQ96QV6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H2AAQ96QV6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HIST1H2AAQ96QV6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 FZD10-202ENST00000539839 3282 ntBASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 AC007613.1-201ENST00000572811 2597 ntBASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 AL163051.1-201ENST00000569214 1512 ntBASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 AL354751.1-201ENST00000412768 1863 ntBASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.78■□□□□ 0.12
HIST1H2AAQ96QV6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 MIR149-201ENST00000384879 89 ntBASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.77■□□□□ 0.12
HIST1H2AAQ96QV6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 AC009102.3-201ENST00000623118 1491 ntBASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H2AAQ96QV6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
HIST1H2AAQ96QV6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms