Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
RNF25Q96BH1 SEC63P1-201ENST00000425785 1258 ntBASIC19.14■□□□□ 0.65
RNF25Q96BH1 AC007663.1-201ENST00000438948 1240 ntBASIC19.14■□□□□ 0.65
RNF25Q96BH1 CCR12P-201ENST00000446203 998 ntBASIC19.14■□□□□ 0.65
RNF25Q96BH1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF25Q96BH1 AC026790.2-201ENST00000606282 430 ntBASIC19.14■□□□□ 0.65
RNF25Q96BH1 KRT17P2-201ENST00000300992 1314 ntBASIC19.14■□□□□ 0.65
RNF25Q96BH1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RNF25Q96BH1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF25Q96BH1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF25Q96BH1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 PHGDH-209ENST00000641074 1780 ntBASIC19.14■□□□□ 0.65
RNF25Q96BH1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF25Q96BH1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 INGX-201ENST00000359239 846 ntBASIC19.13■□□□□ 0.65
RNF25Q96BH1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 BX088651.1-201ENST00000540551 451 ntBASIC19.13■□□□□ 0.65
RNF25Q96BH1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 AC116562.4-202ENST00000641738 218 ntBASIC19.13■□□□□ 0.65
RNF25Q96BH1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 AC040160.2-201ENST00000623816 1675 ntBASIC19.13■□□□□ 0.65
RNF25Q96BH1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF25Q96BH1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF25Q96BH1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 AC009102.3-201ENST00000623118 1491 ntBASIC19.12■□□□□ 0.65
RNF25Q96BH1 HOXB1-202ENST00000577092 1414 ntBASIC19.12■□□□□ 0.65
RNF25Q96BH1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 C2orf69P3-201ENST00000565542 1120 ntBASIC19.12■□□□□ 0.65
RNF25Q96BH1 AP000240.1-201ENST00000609910 452 ntBASIC19.12■□□□□ 0.65
RNF25Q96BH1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF25Q96BH1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF25Q96BH1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms