Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.5■□□□□ 0.39
UBE2E3Q969T4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 PKD1P1-201ENST00000458669 6805 ntBASIC17.5■□□□□ 0.39
UBE2E3Q969T4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBE2E3Q969T4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 AC073508.3-201ENST00000619697 1419 ntBASIC17.49■□□□□ 0.39
UBE2E3Q969T4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 AC005521.1-201ENST00000393351 872 ntBASIC17.49■□□□□ 0.39
UBE2E3Q969T4 RASA4DP-201ENST00000460726 1199 ntBASIC17.49■□□□□ 0.39
UBE2E3Q969T4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2E3Q969T4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBE2E3Q969T4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2E3Q969T4 STARP1-201ENST00000397973 869 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms