Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.78■□□□□ 0.28
CNOT9Q92600 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT9Q92600 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT9Q92600 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT9Q92600 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT9Q92600 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNOT9Q92600 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.78■□□□□ 0.28
CNOT9Q92600 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNOT9Q92600 AL024508.2-201ENST00000607749 1894 ntBASIC16.78■□□□□ 0.28
CNOT9Q92600 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CNOT9Q92600 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CNOT9Q92600 SLC25A3P1-201ENST00000443844 931 ntBASIC16.77■□□□□ 0.28
CNOT9Q92600 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.77■□□□□ 0.28
CNOT9Q92600 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNOT9Q92600 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.77■□□□□ 0.28
CNOT9Q92600 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CNOT9Q92600 AC141257.4-201ENST00000634557 245 ntBASIC16.77■□□□□ 0.28
CNOT9Q92600 AC136944.6-201ENST00000634818 245 ntBASIC16.77■□□□□ 0.28
CNOT9Q92600 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNOT9Q92600 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT9Q92600 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT9Q92600 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CNOT9Q92600 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.77■□□□□ 0.27
CNOT9Q92600 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.77■□□□□ 0.27
CNOT9Q92600 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT9Q92600 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNOT9Q92600 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.77■□□□□ 0.27
CNOT9Q92600 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 AC008764.6-201ENST00000595909 2069 ntBASIC16.76■□□□□ 0.27
CNOT9Q92600 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT9Q92600 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT9Q92600 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT9Q92600 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.76■□□□□ 0.27
CNOT9Q92600 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT9Q92600 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 AL138966.2-201ENST00000621997 464 ntBASIC16.76■□□□□ 0.27
CNOT9Q92600 AC133561.5-201ENST00000635547 218 ntBASIC16.76■□□□□ 0.27
CNOT9Q92600 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CNOT9Q92600 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CNOT9Q92600 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT9Q92600 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CNOT9Q92600 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.76■□□□□ 0.27
CNOT9Q92600 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CNOT9Q92600 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNOT9Q92600 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
CNOT9Q92600 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
CNOT9Q92600 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CNOT9Q92600 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
CNOT9Q92600 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT9Q92600 AP000997.3-201ENST00000623333 2250 ntBASIC16.75■□□□□ 0.27
CNOT9Q92600 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.75■□□□□ 0.27
CNOT9Q92600 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT9Q92600 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CNOT9Q92600 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CNOT9Q92600 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.75■□□□□ 0.27
CNOT9Q92600 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.75■□□□□ 0.27
CNOT9Q92600 AC010203.1-204ENST00000548782 407 ntBASIC16.75■□□□□ 0.27
CNOT9Q92600 MIR3917-201ENST00000580971 93 ntBASIC16.75■□□□□ 0.27
CNOT9Q92600 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.75■□□□□ 0.27
CNOT9Q92600 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNOT9Q92600 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CNOT9Q92600 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT9Q92600 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.74■□□□□ 0.27
CNOT9Q92600 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNOT9Q92600 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
CNOT9Q92600 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CNOT9Q92600 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms