Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 RPS2P1-201ENST00000434010 821 ntBASIC14.11□□□□□ -0.15
LINC01006Q8NI28 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 AC112698.1-201ENST00000510299 916 ntBASIC14.11□□□□□ -0.15
LINC01006Q8NI28 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01006Q8NI28 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 HLA-J-201ENST00000462773 1622 ntBASIC14.1□□□□□ -0.15
LINC01006Q8NI28 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01006Q8NI28 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 MIR1233-2-201ENST00000408138 82 ntBASIC14.09□□□□□ -0.15
LINC01006Q8NI28 MIR1233-1-201ENST00000408722 82 ntBASIC14.09□□□□□ -0.15
LINC01006Q8NI28 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 BX842568.4-201ENST00000421222 227 ntBASIC14.09□□□□□ -0.15
LINC01006Q8NI28 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 IGHV3-22-201ENST00000520721 359 ntBASIC14.09□□□□□ -0.15
LINC01006Q8NI28 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 OR7E14P-202ENST00000530490 1290 ntBASIC14.09□□□□□ -0.15
LINC01006Q8NI28 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 AC145285.3-201ENST00000564603 959 ntBASIC14.09□□□□□ -0.15
LINC01006Q8NI28 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01006Q8NI28 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms