Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 NKILA-202ENST00000614771 2598 ntBASIC17.69■□□□□ 0.42
HIPK4Q8NE63 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.69■□□□□ 0.42
HIPK4Q8NE63 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 AL139384.1-201ENST00000612143 3047 ntBASIC17.68■□□□□ 0.42
HIPK4Q8NE63 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 AC018695.7-201ENST00000624587 2492 ntBASIC17.68■□□□□ 0.42
HIPK4Q8NE63 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIPK4Q8NE63 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HIPK4Q8NE63 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIPK4Q8NE63 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms