Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 AL160237.2-201ENST00000556165 472 ntBASIC20.58■□□□□ 0.89
RETREG2Q8NC44 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RETREG2Q8NC44 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RETREG2Q8NC44 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 AC009078.2-202ENST00000463353 338 ntBASIC20.57■□□□□ 0.88
RETREG2Q8NC44 AC104819.1-201ENST00000504587 486 ntBASIC20.57■□□□□ 0.88
RETREG2Q8NC44 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 AC090616.6-201ENST00000582640 721 ntBASIC20.57■□□□□ 0.88
RETREG2Q8NC44 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 IGHV3-41-201ENST00000613121 348 ntBASIC20.57■□□□□ 0.88
RETREG2Q8NC44 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.57■□□□□ 0.88
RETREG2Q8NC44 AL031008.1-201ENST00000619963 541 ntBASIC20.57■□□□□ 0.88
RETREG2Q8NC44 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETREG2Q8NC44 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 Z83836.1-201ENST00000624605 1642 ntBASIC20.56■□□□□ 0.88
RETREG2Q8NC44 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 NOC2LP1-202ENST00000452600 2235 ntBASIC20.56■□□□□ 0.88
RETREG2Q8NC44 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 KRT18P31-201ENST00000506277 1292 ntBASIC20.56■□□□□ 0.88
RETREG2Q8NC44 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 AC009065.1-201ENST00000564055 1225 ntBASIC20.56■□□□□ 0.88
RETREG2Q8NC44 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RETREG2Q8NC44 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms