Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC005829.1-201ENST00000570002 483 ntBASIC25.11■■□□□ 1.61
XRN1Q8IZH2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
XRN1Q8IZH2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 MKNK2P1-201ENST00000437526 628 ntBASIC25.1■■□□□ 1.61
XRN1Q8IZH2 HCG4B-203ENST00000450128 991 ntBASIC25.1■■□□□ 1.61
XRN1Q8IZH2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 AC097374.2-201ENST00000618617 1306 ntBASIC25.1■■□□□ 1.61
XRN1Q8IZH2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
XRN1Q8IZH2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
XRN1Q8IZH2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 IGLL3P-201ENST00000412472 434 ntBASIC25.08■■□□□ 1.61
XRN1Q8IZH2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC25.08■■□□□ 1.61
XRN1Q8IZH2 C20orf181-201ENST00000623918 480 ntBASIC25.08■■□□□ 1.61
XRN1Q8IZH2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
XRN1Q8IZH2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
XRN1Q8IZH2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
XRN1Q8IZH2 ELL2P1-201ENST00000413990 1906 ntBASIC25.08■■□□□ 1.6
XRN1Q8IZH2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 CALY-203ENST00000368558 825 ntTSL 5 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 CNN2P11-201ENST00000429351 262 ntBASIC25.07■■□□□ 1.6
XRN1Q8IZH2 PRYP5-201ENST00000451909 266 ntBASIC25.07■■□□□ 1.6
XRN1Q8IZH2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 SPCS2P1-201ENST00000561636 679 ntBASIC25.07■■□□□ 1.6
XRN1Q8IZH2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
XRN1Q8IZH2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 AC006504.4-201ENST00000592118 1568 ntBASIC25.06■■□□□ 1.6
XRN1Q8IZH2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 NCF1C-201ENST00000438382 1427 ntBASIC25.06■■□□□ 1.6
XRN1Q8IZH2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC25.06■■□□□ 1.6
XRN1Q8IZH2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms