Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 REXO1L9P-201ENST00000604264 2108 ntBASIC16.21■□□□□ 0.18
LRRC28Q86X40 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
LRRC28Q86X40 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC28Q86X40 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.21■□□□□ 0.18
LRRC28Q86X40 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.21■□□□□ 0.18
LRRC28Q86X40 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 B3GAT3P1-201ENST00000471720 806 ntBASIC16.2■□□□□ 0.18
LRRC28Q86X40 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 AC130371.2-201ENST00000619443 611 ntBASIC16.2■□□□□ 0.18
LRRC28Q86X40 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC28Q86X40 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC28Q86X40 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 MTMR9LP-203ENST00000426597 1545 ntBASIC16.19■□□□□ 0.18
LRRC28Q86X40 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 MMP23A-201ENST00000234610 1017 ntBASIC16.19■□□□□ 0.18
LRRC28Q86X40 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 MESTP1-201ENST00000404287 994 ntBASIC16.19■□□□□ 0.18
LRRC28Q86X40 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 AC011506.1-201ENST00000474329 610 ntBASIC16.19■□□□□ 0.18
LRRC28Q86X40 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 AC112777.1-201ENST00000540175 1423 ntBASIC16.19■□□□□ 0.18
LRRC28Q86X40 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LRRC28Q86X40 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC28Q86X40 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC28Q86X40 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC28Q86X40 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.18■□□□□ 0.18
LRRC28Q86X40 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms