Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 ABHD17AP1-201ENST00000358206 933 ntBASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 MIR564-202ENST00000385049 94 ntBASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 AL023284.2-201ENST00000405850 579 ntBASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CRYGFP-201ENST00000418459 633 ntBASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 GPAT2P1-201ENST00000444924 1672 ntBASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 TBC1D3P2-202ENST00000577902 1649 ntBASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL55Q7Z7F7 AC135776.1-201ENST00000319817 2481 ntBASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 GCSHP5-201ENST00000443090 522 ntBASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 PENK-204ENST00000518770 863 ntTSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 AC233702.5-201ENST00000584107 538 ntBASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 AC008622.2-201ENST00000617006 1229 ntBASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 AL049637.2-201ENST00000641778 930 ntBASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL55Q7Z7F7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms