Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGCS1Q01581 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.54■□□□□ 0.4
HMGCS1Q01581 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCS1Q01581 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
HMGCS1Q01581 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 LINC00896-202ENST00000609602 2128 ntBASIC17.53■□□□□ 0.4
HMGCS1Q01581 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCS1Q01581 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCS1Q01581 AC012317.2-201ENST00000623305 2251 ntBASIC17.52■□□□□ 0.4
HMGCS1Q01581 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 AL024508.2-201ENST00000607749 1894 ntBASIC17.52■□□□□ 0.4
HMGCS1Q01581 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 AC093010.1-201ENST00000473625 1624 ntBASIC17.52■□□□□ 0.4
HMGCS1Q01581 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 AC010240.3-201ENST00000607688 395 ntBASIC17.52■□□□□ 0.4
HMGCS1Q01581 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCS1Q01581 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCS1Q01581 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS1Q01581 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS1Q01581 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS1Q01581 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS1Q01581 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS1Q01581 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS1Q01581 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGCS1Q01581 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS1Q01581 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCS1Q01581 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGCS1Q01581 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCS1Q01581 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCS1Q01581 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCS1Q01581 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
HMGCS1Q01581 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGCS1Q01581 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCS1Q01581 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCS1Q01581 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HMGCS1Q01581 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms