Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNRPEP62304 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNRPEP62304 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SNRPEP62304 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNRPEP62304 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNRPEP62304 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNRPEP62304 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNRPEP62304 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.98□□□□□ -0.17
SNRPEP62304 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.98□□□□□ -0.17
SNRPEP62304 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SNRPEP62304 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SNRPEP62304 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SNRPEP62304 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC13.97□□□□□ -0.17
SNRPEP62304 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.97□□□□□ -0.17
SNRPEP62304 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 CEP120-209ENST00000515110 606 ntTSL 3 BASIC13.97□□□□□ -0.17
SNRPEP62304 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.97□□□□□ -0.17
SNRPEP62304 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SNRPEP62304 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.97□□□□□ -0.17
SNRPEP62304 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.97□□□□□ -0.17
SNRPEP62304 FAM45BP-202ENST00000592932 1624 ntBASIC13.97□□□□□ -0.17
SNRPEP62304 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SNRPEP62304 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNRPEP62304 SNX18-202ENST00000343017 3140 ntBASIC13.97□□□□□ -0.17
SNRPEP62304 AC092068.3-201ENST00000587894 2016 ntBASIC13.97□□□□□ -0.17
SNRPEP62304 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.96□□□□□ -0.17
SNRPEP62304 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SNRPEP62304 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SNRPEP62304 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 FEM1AP3-201ENST00000403722 1741 ntBASIC13.96□□□□□ -0.17
SNRPEP62304 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.96□□□□□ -0.17
SNRPEP62304 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SNRPEP62304 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SNRPEP62304 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 OR2I1P-207ENST00000453522 948 ntBASIC13.96□□□□□ -0.17
SNRPEP62304 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC13.96□□□□□ -0.17
SNRPEP62304 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.96□□□□□ -0.17
SNRPEP62304 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.96□□□□□ -0.17
SNRPEP62304 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SNRPEP62304 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNRPEP62304 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SNRPEP62304 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.96□□□□□ -0.18
SNRPEP62304 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SNRPEP62304 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
SNRPEP62304 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNRPEP62304 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.96□□□□□ -0.18
SNRPEP62304 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.96□□□□□ -0.18
SNRPEP62304 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SNRPEP62304 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNRPEP62304 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNRPEP62304 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
SNRPEP62304 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNRPEP62304 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SNRPEP62304 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNRPEP62304 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNRPEP62304 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.95□□□□□ -0.18
SNRPEP62304 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms