Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH12P55289 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH12P55289 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH12P55289 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH12P55289 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH12P55289 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH12P55289 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH12P55289 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH12P55289 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH12P55289 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDH12P55289 GPAT2P1-201ENST00000444924 1672 ntBASIC16.97■□□□□ 0.31
CDH12P55289 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH12P55289 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.97■□□□□ 0.31
CDH12P55289 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDH12P55289 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH12P55289 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 AC099343.3-201ENST00000605834 2503 ntBASIC16.97■□□□□ 0.31
CDH12P55289 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 AL355355.2-201ENST00000442321 338 ntBASIC16.97■□□□□ 0.31
CDH12P55289 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH12P55289 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH12P55289 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH12P55289 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CDH12P55289 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH12P55289 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH12P55289 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CDH12P55289 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH12P55289 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH12P55289 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 MIR564-202ENST00000385049 94 ntBASIC16.96■□□□□ 0.31
CDH12P55289 AP000593.1-201ENST00000393668 712 ntBASIC16.96■□□□□ 0.31
CDH12P55289 MCCD1P1-208ENST00000445732 328 ntBASIC16.96■□□□□ 0.31
CDH12P55289 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH12P55289 Z99916.2-201ENST00000604037 246 ntBASIC16.96■□□□□ 0.31
CDH12P55289 AC026471.5-201ENST00000615068 467 ntBASIC16.96■□□□□ 0.31
CDH12P55289 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CDH12P55289 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDH12P55289 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH12P55289 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH12P55289 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH12P55289 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 PHGDH-209ENST00000641074 1780 ntBASIC16.95■□□□□ 0.3
CDH12P55289 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH12P55289 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 CRYGFP-201ENST00000418459 633 ntBASIC16.95■□□□□ 0.3
CDH12P55289 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms