Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH8P55286 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDH8P55286 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH8P55286 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDH8P55286 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH8P55286 LINC00167-201ENST00000530583 1419 ntBASIC19.39■□□□□ 0.69
CDH8P55286 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 AC132938.6-201ENST00000623828 1655 ntBASIC19.39■□□□□ 0.69
CDH8P55286 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH8P55286 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDH8P55286 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CDH8P55286 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDH8P55286 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH8P55286 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH8P55286 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH8P55286 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH8P55286 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CDH8P55286 KRT8P26-201ENST00000534154 1276 ntBASIC19.38■□□□□ 0.69
CDH8P55286 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH8P55286 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.38■□□□□ 0.69
CDH8P55286 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 AC135050.7-201ENST00000624508 2218 ntBASIC19.38■□□□□ 0.69
CDH8P55286 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH8P55286 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH8P55286 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH8P55286 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDH8P55286 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
CDH8P55286 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH8P55286 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
CDH8P55286 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDH8P55286 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CDH8P55286 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH8P55286 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH8P55286 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH8P55286 BX276092.5-203ENST00000456199 560 ntBASIC19.37■□□□□ 0.69
CDH8P55286 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH8P55286 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH8P55286 AC008687.5-201ENST00000593746 558 ntBASIC19.37■□□□□ 0.69
CDH8P55286 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 AC093458.2-201ENST00000623150 629 ntBASIC19.37■□□□□ 0.69
CDH8P55286 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH8P55286 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH8P55286 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CDH8P55286 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH8P55286 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH8P55286 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH8P55286 AC093010.1-201ENST00000473625 1624 ntBASIC19.36■□□□□ 0.69
CDH8P55286 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH8P55286 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDH8P55286 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH8P55286 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH8P55286 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDH8P55286 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH8P55286 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH8P55286 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH8P55286 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH8P55286 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH8P55286 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms