Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZNF140P52738 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZNF140P52738 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ZNF140P52738 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF140P52738 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.1■□□□□ 0.49
ZNF140P52738 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF140P52738 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF140P52738 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 AL671277.2-201ENST00000458060 996 ntBASIC18.1■□□□□ 0.49
ZNF140P52738 DUTP2-201ENST00000519164 463 ntBASIC18.1■□□□□ 0.49
ZNF140P52738 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF140P52738 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF140P52738 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF140P52738 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF140P52738 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
ZNF140P52738 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF140P52738 AC018470.1-201ENST00000624790 3129 ntBASIC18.09■□□□□ 0.49
ZNF140P52738 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.09■□□□□ 0.49
ZNF140P52738 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF140P52738 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF140P52738 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 SLC25A6P5-201ENST00000435663 894 ntBASIC18.09■□□□□ 0.49
ZNF140P52738 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF140P52738 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF140P52738 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF140P52738 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF140P52738 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
ZNF140P52738 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZNF140P52738 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF140P52738 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.09■□□□□ 0.49
ZNF140P52738 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF140P52738 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF140P52738 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ZNF140P52738 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF140P52738 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
ZNF140P52738 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF140P52738 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.08■□□□□ 0.49
ZNF140P52738 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
ZNF140P52738 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF140P52738 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF140P52738 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.08■□□□□ 0.49
ZNF140P52738 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.08■□□□□ 0.49
ZNF140P52738 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 IGHGP-201ENST00000390555 1178 ntBASIC18.08■□□□□ 0.48
ZNF140P52738 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.08■□□□□ 0.48
ZNF140P52738 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.08■□□□□ 0.48
ZNF140P52738 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.08■□□□□ 0.48
ZNF140P52738 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF140P52738 ZNF444P1-201ENST00000559497 298 ntBASIC18.08■□□□□ 0.48
ZNF140P52738 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ZNF140P52738 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.08■□□□□ 0.48
ZNF140P52738 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.08■□□□□ 0.48
ZNF140P52738 AC004263.2-201ENST00000617183 678 ntBASIC18.08■□□□□ 0.48
ZNF140P52738 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ZNF140P52738 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.08■□□□□ 0.48
ZNF140P52738 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.08■□□□□ 0.48
ZNF140P52738 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
ZNF140P52738 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF140P52738 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF140P52738 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.08■□□□□ 0.48
ZNF140P52738 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
ZNF140P52738 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms