Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT20P35900 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KRT20P35900 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KRT20P35900 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 AL023284.2-201ENST00000405850 579 ntBASIC17.31■□□□□ 0.36
KRT20P35900 HMGA1P5-201ENST00000412453 271 ntBASIC17.31■□□□□ 0.36
KRT20P35900 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT20P35900 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT20P35900 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.31■□□□□ 0.36
KRT20P35900 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 AC145285.6-201ENST00000604632 637 ntBASIC17.31■□□□□ 0.36
KRT20P35900 AC008622.2-201ENST00000617006 1229 ntBASIC17.31■□□□□ 0.36
KRT20P35900 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
KRT20P35900 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 GPAT2P1-201ENST00000444924 1672 ntBASIC17.31■□□□□ 0.36
KRT20P35900 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
KRT20P35900 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KRT20P35900 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT20P35900 AC012313.1-201ENST00000593393 3059 ntBASIC17.31■□□□□ 0.36
KRT20P35900 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT20P35900 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
KRT20P35900 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT20P35900 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT20P35900 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 AL109659.2-201ENST00000606809 1674 ntBASIC17.3■□□□□ 0.36
KRT20P35900 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KRT20P35900 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
KRT20P35900 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 ECEL1P2-202ENST00000465689 757 ntBASIC17.3■□□□□ 0.36
KRT20P35900 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT20P35900 AC068587.9-201ENST00000641814 219 ntBASIC17.3■□□□□ 0.36
KRT20P35900 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 AL162741.1-201ENST00000565563 1558 ntBASIC17.3■□□□□ 0.36
KRT20P35900 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KRT20P35900 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KRT20P35900 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT20P35900 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT20P35900 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT20P35900 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT20P35900 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT20P35900 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT20P35900 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT20P35900 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT20P35900 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
KRT20P35900 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT20P35900 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT20P35900 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT20P35900 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
KRT20P35900 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT20P35900 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
KRT20P35900 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT20P35900 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms