Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC13P31276 AC135776.1-201ENST00000319817 2481 ntBASIC18.8■□□□□ 0.6
HOXC13P31276 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HOXC13P31276 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC13P31276 AC135050.7-201ENST00000624508 2218 ntBASIC18.8■□□□□ 0.6
HOXC13P31276 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXC13P31276 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
HOXC13P31276 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 PHGDH-209ENST00000641074 1780 ntBASIC18.79■□□□□ 0.6
HOXC13P31276 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.79■□□□□ 0.6
HOXC13P31276 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC13P31276 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.79■□□□□ 0.6
HOXC13P31276 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HOXC13P31276 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXC13P31276 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.79■□□□□ 0.6
HOXC13P31276 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXC13P31276 AC099336.1-202ENST00000602961 463 ntBASIC18.79■□□□□ 0.6
HOXC13P31276 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC13P31276 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXC13P31276 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXC13P31276 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC13P31276 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOXC13P31276 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HOXC13P31276 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 AC104819.1-201ENST00000504587 486 ntBASIC18.78■□□□□ 0.6
HOXC13P31276 AC113404.2-201ENST00000507884 177 ntBASIC18.78■□□□□ 0.6
HOXC13P31276 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.78■□□□□ 0.6
HOXC13P31276 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 AC024563.2-201ENST00000603282 481 ntBASIC18.78■□□□□ 0.6
HOXC13P31276 AL121912.1-201ENST00000603683 238 ntBASIC18.78■□□□□ 0.6
HOXC13P31276 AL390719.2-201ENST00000606993 987 ntBASIC18.78■□□□□ 0.6
HOXC13P31276 AC120114.3-201ENST00000611923 658 ntBASIC18.78■□□□□ 0.6
HOXC13P31276 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 AC233702.3-201ENST00000578656 1387 ntBASIC18.78■□□□□ 0.6
HOXC13P31276 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXC13P31276 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC13P31276 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC13P31276 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HOXC13P31276 AL354751.1-201ENST00000412768 1863 ntBASIC18.77■□□□□ 0.6
HOXC13P31276 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HOXC13P31276 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HOXC13P31276 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXC13P31276 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXC13P31276 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC13P31276 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HOXC13P31276 AL353801.3-201ENST00000609898 542 ntBASIC18.77■□□□□ 0.6
HOXC13P31276 IGHV3-41-201ENST00000613121 348 ntBASIC18.77■□□□□ 0.6
HOXC13P31276 TP73-AS1-207ENST00000624167 988 ntBASIC18.77■□□□□ 0.6
HOXC13P31276 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC13P31276 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HOXC13P31276 AC093010.1-201ENST00000473625 1624 ntBASIC18.77■□□□□ 0.6
HOXC13P31276 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms