Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2BFMP0C1H6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 SDHAP2-201ENST00000455183 2001 ntBASIC16.08■□□□□ 0.16
H2BFMP0C1H6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 TSPY7P-201ENST00000431358 1114 ntBASIC16.08■□□□□ 0.16
H2BFMP0C1H6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 AP000525.1-201ENST00000608286 694 ntBASIC16.08■□□□□ 0.16
H2BFMP0C1H6 CR769767.2-201ENST00000622735 460 ntBASIC16.08■□□□□ 0.16
H2BFMP0C1H6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 AC116562.4-202ENST00000641738 218 ntBASIC16.08■□□□□ 0.16
H2BFMP0C1H6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
H2BFMP0C1H6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 AC134043.2-201ENST00000624206 2238 ntBASIC16.07■□□□□ 0.16
H2BFMP0C1H6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 CROCCP1-201ENST00000426910 5675 ntBASIC16.07■□□□□ 0.16
H2BFMP0C1H6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2BFMP0C1H6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 MIR1238-201ENST00000408483 83 ntBASIC16.06■□□□□ 0.16
H2BFMP0C1H6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 C2orf69P3-201ENST00000565542 1120 ntBASIC16.06■□□□□ 0.16
H2BFMP0C1H6 WWOX-216ENST00000569818 525 ntBASIC16.06■□□□□ 0.16
H2BFMP0C1H6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2BFMP0C1H6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms