Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
HMGN1P05114 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGN1P05114 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGN1P05114 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGN1P05114 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGN1P05114 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGN1P05114 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGN1P05114 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGN1P05114 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGN1P05114 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HMGN1P05114 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 AC006116.8-202ENST00000587620 1550 ntBASIC16.5■□□□□ 0.23
HMGN1P05114 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGN1P05114 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGN1P05114 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGN1P05114 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.5■□□□□ 0.23
HMGN1P05114 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGN1P05114 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGN1P05114 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
HMGN1P05114 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HMGN1P05114 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
HMGN1P05114 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HMGN1P05114 SDHAP2-201ENST00000455183 2001 ntBASIC16.49■□□□□ 0.23
HMGN1P05114 CA15P1-201ENST00000481698 905 ntBASIC16.49■□□□□ 0.23
HMGN1P05114 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGN1P05114 C1QBPP2-201ENST00000528754 825 ntBASIC16.49■□□□□ 0.23
HMGN1P05114 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGN1P05114 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.49■□□□□ 0.23
HMGN1P05114 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMGN1P05114 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
HMGN1P05114 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGN1P05114 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGN1P05114 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMGN1P05114 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGN1P05114 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGN1P05114 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HMGN1P05114 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGN1P05114 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGN1P05114 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HMGN1P05114 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HMGN1P05114 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 MESTP1-201ENST00000404287 994 ntBASIC16.48■□□□□ 0.23
HMGN1P05114 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.48■□□□□ 0.23
HMGN1P05114 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.48■□□□□ 0.23
HMGN1P05114 DGCR10-201ENST00000609839 495 ntBASIC16.48■□□□□ 0.23
HMGN1P05114 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGN1P05114 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGN1P05114 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGN1P05114 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
HMGN1P05114 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGN1P05114 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGN1P05114 AC093010.1-201ENST00000473625 1624 ntBASIC16.48■□□□□ 0.23
HMGN1P05114 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms