Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC132938.6-201ENST00000623828 1655 ntBASIC19.56■□□□□ 0.72
HLA-DRAP01903 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 LINC00602-201ENST00000629776 2065 ntBASIC19.55■□□□□ 0.72
HLA-DRAP01903 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 AP003733.1-201ENST00000491725 852 ntBASIC19.55■□□□□ 0.72
HLA-DRAP01903 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DRAP01903 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DRAP01903 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 RNF126P1-202ENST00000569893 925 ntBASIC19.54■□□□□ 0.72
HLA-DRAP01903 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 AC004263.2-201ENST00000617183 678 ntBASIC19.54■□□□□ 0.72
HLA-DRAP01903 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-DRAP01903 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DRAP01903 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DRAP01903 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 IGHGP-201ENST00000390555 1178 ntBASIC19.53■□□□□ 0.72
HLA-DRAP01903 MIR1224-201ENST00000408193 85 ntBASIC19.53■□□□□ 0.72
HLA-DRAP01903 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 KRT18P35-201ENST00000510488 1269 ntBASIC19.53■□□□□ 0.72
HLA-DRAP01903 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DRAP01903 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.53■□□□□ 0.72
HLA-DRAP01903 AC010331.1-201ENST00000611423 582 ntBASIC19.53■□□□□ 0.72
HLA-DRAP01903 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DRAP01903 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DRAP01903 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DRAP01903 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DRAP01903 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DRAP01903 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DRAP01903 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HLA-DRAP01903 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms