Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AP000525.1-201ENST00000608286 694 ntBASIC17.28■□□□□ 0.36
SCN2BO60939 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.28■□□□□ 0.36
SCN2BO60939 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.28■□□□□ 0.36
SCN2BO60939 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SCN2BO60939 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
SCN2BO60939 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SCN2BO60939 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SCN2BO60939 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SCN2BO60939 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SCN2BO60939 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCN2BO60939 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
SCN2BO60939 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.27■□□□□ 0.36
SCN2BO60939 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.27■□□□□ 0.36
SCN2BO60939 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SCN2BO60939 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SCN2BO60939 AL390955.1-201ENST00000428694 934 ntBASIC17.27■□□□□ 0.36
SCN2BO60939 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SCN2BO60939 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SCN2BO60939 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SCN2BO60939 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCN2BO60939 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SCN2BO60939 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.27■□□□□ 0.35
SCN2BO60939 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCN2BO60939 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SCN2BO60939 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SCN2BO60939 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.26■□□□□ 0.35
SCN2BO60939 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.26■□□□□ 0.35
SCN2BO60939 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.26■□□□□ 0.35
SCN2BO60939 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.26■□□□□ 0.35
SCN2BO60939 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.26■□□□□ 0.35
SCN2BO60939 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.26■□□□□ 0.35
SCN2BO60939 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 AC006116.8-202ENST00000587620 1550 ntBASIC17.26■□□□□ 0.35
SCN2BO60939 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 AL024508.2-201ENST00000607749 1894 ntBASIC17.26■□□□□ 0.35
SCN2BO60939 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.26■□□□□ 0.35
SCN2BO60939 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCN2BO60939 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SCN2BO60939 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.25■□□□□ 0.35
SCN2BO60939 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SCN2BO60939 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN2BO60939 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SCN2BO60939 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCN2BO60939 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.25■□□□□ 0.35
SCN2BO60939 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCN2BO60939 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.25■□□□□ 0.35
SCN2BO60939 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SCN2BO60939 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.25■□□□□ 0.35
SCN2BO60939 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.25■□□□□ 0.35
SCN2BO60939 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.25■□□□□ 0.35
SCN2BO60939 BX088651.1-201ENST00000540551 451 ntBASIC17.25■□□□□ 0.35
SCN2BO60939 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.25■□□□□ 0.35
SCN2BO60939 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms