Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN5O00501 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN5O00501 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLDN5O00501 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN5O00501 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.15■□□□□ 0.66
CLDN5O00501 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN5O00501 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN5O00501 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN5O00501 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLDN5O00501 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN5O00501 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN5O00501 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN5O00501 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CLDN5O00501 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CLDN5O00501 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN5O00501 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN5O00501 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN5O00501 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN5O00501 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CLDN5O00501 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 AP005901.3-202ENST00000581653 237 ntBASIC19.14■□□□□ 0.65
CLDN5O00501 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN5O00501 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.14■□□□□ 0.65
CLDN5O00501 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.14■□□□□ 0.65
CLDN5O00501 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN5O00501 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.14■□□□□ 0.65
CLDN5O00501 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CLDN5O00501 AC233702.3-201ENST00000578656 1387 ntBASIC19.14■□□□□ 0.65
CLDN5O00501 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN5O00501 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CLDN5O00501 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLDN5O00501 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CLDN5O00501 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN5O00501 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 AL096828.2-201ENST00000567259 1965 ntBASIC19.13■□□□□ 0.65
CLDN5O00501 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN5O00501 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN5O00501 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN5O00501 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN5O00501 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.13■□□□□ 0.65
CLDN5O00501 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN5O00501 AC068472.1-201ENST00000474589 881 ntBASIC19.13■□□□□ 0.65
CLDN5O00501 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN5O00501 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN5O00501 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.13■□□□□ 0.65
CLDN5O00501 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLDN5O00501 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN5O00501 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN5O00501 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN5O00501 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN5O00501 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN5O00501 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN5O00501 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms