Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00862A6NCI5 TSPY9P-201ENST00000440215 945 ntBASIC14.77□□□□□ -0.05
LINC00862A6NCI5 TSPY11P-201ENST00000442607 1045 ntBASIC14.77□□□□□ -0.05
LINC00862A6NCI5 SLC47A1P1-202ENST00000449666 945 ntBASIC14.77□□□□□ -0.05
LINC00862A6NCI5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LINC00862A6NCI5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 CICP13-201ENST00000422015 2789 ntBASIC14.76□□□□□ -0.05
LINC00862A6NCI5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 OR6D1P-203ENST00000641209 4860 ntBASIC14.76□□□□□ -0.05
LINC00862A6NCI5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00862A6NCI5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 KRT8P45-201ENST00000414328 1447 ntBASIC14.75□□□□□ -0.05
LINC00862A6NCI5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00862A6NCI5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms